Congenital Cataracts NGS Panel

  • Panel Description
  • Test Description
  • CPT Codes
  • Resources

Panel Description

Congenital cataracts

A cataract is an opacity of the lens in the eye that makes vision hazy. Congenital cataracts are present at birth and may lead to blindness if not treated. The hazing effect of a cataract may affect the entire eye or just a part of it. Cataract removal surgery may be recommended depending on the severity. Cataracts may be isolated or observed as one of several features of a genetic condition. Some conditions associated with early-onset cataracts may be diagnosed during routine newborn screening.This panel may be appropriate for anyone with a personal or family history of congenital or early-onset cataracts. Cataracts can be diagnosed without genetic testing, but providers can provide more personalized care and assess risk for related conditions by identifying the pathogenic variant responsible. Other features of genetic conditions associated with congenital cataracts include other eye abnormalities, feeding difficulties, developmental delay or other neurological problems, hearing loss, Wilms tumor, kidney abnormalities, anemia, and diabetes.Genetic testing can identify the pathogenic variant responsible for congenital cataracts, opening doors for more personalized treatment and potential eligibility for clinical trials.

Genetic testing for congenital cataracts can:
  • Establish or confirm the appropriate diagnosis
  • Identify risks for additional related symptoms
  • Connect patients to relevant resources & support
  • Result in more personalized treatment and symptom management
  • Inform family members about their own risk factors
  • Provide options for family planning

Test Description

Print
  • Sequencing
  • Del/Dup
  • Rush / STAT
  • Exclude VUS
  • MCC
  • Duo/Trio
3-5 weeks
Call for details
ABHD12, AGK, BEST1, BFSP1, BFSP2, CAV1, CHMP4B, CLPB, COL18A1, CRYAA, CRYAB, CRYBA1, CRYBA2, CRYBA4, CRYBB1, CRYBB2, CRYBB3, CRYGB, CRYGC, CRYGD, CRYGS, CTDP1, EPHA2, EYA1, FAM126A, FOXE3, FTL, FYCO1, GALK1, GCNT2, GFER, GJA3, GJA8, HSF4, JAM3, LEMD2, LIM2, LSS, MIP, MIR184, MSMO1, NHS, P3H2, PAX6, PITX3, PXDN, RDH11, SIL1, SIPA1L3, SIX6, SLC16A12, SLC33A1, TDRD7, UNC45B, VIM, WFS1 ( 56 genes )
96% at 20x
Blood (two 4ml EDTA tubes, lavender top) or Extracted DNA (3ug in EB buffer) or Buccal Swab or Saliva (kits available upon request)
All sequencing technologies have limitations. This analysis is performed by Next Generation Sequencing (NGS) and is designed to examine coding regions and splicing junctions. Although next generation sequencing technologies and our bioinformatics analysis significantly reduce the contribution of pseudogene sequences or other highly-homologous sequences, these may still occasionally interfere with the technical ability of the assay to identify pathogenic variant alleles in both sequencing and deletion/duplication analyses. Sanger sequencing is used to confirm variants with low quality scores and to meet coverage standards. If ordered, deletion/duplication analysis can identify alterations of genomic regions which include one whole gene (buccal swab specimens and whole blood specimens) and are two or more contiguous exons in size (whole blood specimens only); single exon deletions or duplications may occasionally be identified, but are not routinely detected by this test. Identified putative deletions or duplications are confirmed by an orthogonal method (qPCR or MLPA). This assay will not detect certain types of genomic alterations which may cause disease such as, but not limited to, translocations or inversions, repeat expansions (eg. trinucleotides or hexanucleotides), alterations in most regulatory regions (promoter regions) or deep intronic regions (greater than 20bp from an exon). This assay is not designed or validated for the detection of somatic mosaicism or somatic mutations.

CPT Code 81405, 81406, 81479x2

NOTE:  The CPT codes listed on the website are in accordance with Current Procedural Terminology, a publication of the American Medical Association. CPT codes are provided here for the convenience of our clients. Clients who bill for services should make the final decision on which codes to use.

Resources

DescriptionDownload
Congenital Cataracts