FFPE WES FFPE RNA-Seq Solid Tumor Molecular Profiling

FFPE WES

Our CLIA-validated WES services for FFPE specimens are designed for clinical trials, clinical diagnostics, and for researchers involved in clinical research. In addition, we offer standard data analysis options for WES - including mapping, alignment, somatic variant calling and annotation. All of our sequencing services are performed using state-of-the-art technology to ensure the highest quality and quickest turnaround times available.

Turnaround Time
  • Minimum Order Quantity: 3 samples
  • Turnaround Time: 2-3 weeks
Services Available
  • Pathology Review
  • Extraction
  • Library Prep
  • Sequencing
  • Alignment
  • Somatic Variant Calling
  • QC Check
Deliverables
  • FastQ
  • BAM
  • VCF
  • QC Report
Species
  • Human
Technical Specifications

Customized options are available.
Please contact SeqService@fulgentgenetics.com for more details.

  • 300X mean coverage (recommended)
  • Estimated 100-150M read pairs
  • Paired-end 2x150 bp
Sample Requirements
  • <10um: 10 FFPE slides
  • >10um: 6 FFPE slides
  • DNA: >300ng
  • DIN >5

FFPE RNA-Seq

Our CLIA-validated RNA sequencing services for FFPE specimens are designed for clinical trials, clinical diagnostics, and for researchers involved in clinical research. In addition, we offer standard data analysis options for RNA-Seq - including mapping, alignment, variant calling, and gene expression analysis. All of our sequencing services are performed using state-of-the-art technology to ensure the highest quality and quickest turnaround times available.

Turnaround Time
  • Minimum Order Quantity: 6 samples
  • Turnaround Time: 2-3 weeks
Services Available
  • Pathology Review
  • Extraction
  • Library Prep
  • Sequencing
  • Alignment
  • Differential Gene Expression Analysis
  • QC Check
Deliverables
  • FastQ
  • BAM
  • FPKM
  • QC Report
Species
  • Human
Technical Specifications

Customized options are available.
Please contact SeqService@fulgentgenetics.com for more details.

  • 50M read pairs
  • Paired-end 2x150 bp
  • Capture type: Illumina TruSeq RNA Exome
Sample Requirements
  • <10um: 10 FFPE slides
  • >10um: 6 FFPE slides
  • RNA: 400ng
  • RIN >5

Solid Tumor Molecular Profiling

Fulgent offers clinically validated Solid Tumor Molecular Profiling services from FFPE specimen using Illumina’s TST-170 kit. DNA and RNA are sequenced and analyzed in parallel. All of our sequencing services are performed using state-of-the-art Illumina HiSeq and NovaSeq platforms to ensure the highest quality and quickest turnaround times available.

Turnaround Time
  • Minimum Order Quantity: 8 samples
  • Turnaround Time: 2-3 weeks
Services Available
  • Pathology Review
  • Extraction
  • Library Prep
  • Sequencing
  • Variant Calling
    • Small variant, CNV, fusion, splice
  • Variant Annotation
  • Tumor Mutational Burden
Deliverables
  • FastQ
  • BAM
  • VCF
  • TSV
  • QC Report
Technical Specifications

Customized options are available.
Please contact SeqService@fulgentgenetics.com for more details.

  • >500X coverage (average de-duplicated sequencing depth)
  • Paired-end 2x150 bp
Sample Requirements
  • <10um: 10 FFPE slides
  • >10um: 6 FFPE slides
  • FFPE derived DNA: >40ng, DIN >5
  • FFPE derived RNA: >200ng, RIN >5

Delivery Format

Your data privacy and security is our priority. That's why your data will be delivered to you personally through our Fulgent Cloud. We utitlize a FTP that uses TLS/SSL certificates.

How To Order

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